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基于ST-LSTM的植物生長發(fā)育預測模型
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山東省自然科學基金重點項目(ZR2020KF002)、山東省重點研發(fā)計劃(重大科技創(chuàng)新工程)項目(2021LZGC013)和國家自然科學基金項目(31871543)


Plant Growth and Development Prediction Model Based on ST-LSTM
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    摘要:

    提早預知植物生長發(fā)育是智能育種過程的重要組成部分,針對植物表型難以精準預測和模擬的問題,,利用植物生長發(fā)育的空間和時間依賴性,,提出了一種基于時空長短時記憶網絡(Spatiotemporal long short-term memory,ST-LSTM)的植物生長發(fā)育預測模型,,實現植物生長發(fā)育的預測,。首先,通過微調Mask R-CNN模型實現識別,、提取植物掩模,,預處理具有時空相關性的植物生長發(fā)育圖像序列,構建植物生長發(fā)育預測數據集,。然后,,基于ST-LSTM建立植物生長發(fā)育預測模型,利用歷史生長發(fā)育圖像序列,,融合時空深度特征,,預測植物未來的生長發(fā)育圖像序列。研究結果表明,,所提出模型預測的圖像序列與生長發(fā)育實際圖像序列具有較高的一致性和相似性,,首個預測時間節(jié)點的結構相似度為0.8741,均方誤差為17.10,,峰值信噪比為30.83,,測試集的冠層葉面積、冠幅和葉片數預測R2分別為0.9619,、0.9087和0.9158,。該研究實現了基于植物生長發(fā)育圖像序列的生長發(fā)育預測,有效減少了田間反復試驗的時間,、土地和人力成本,,為提高智能育種效率提供了參考。

    Abstract:

    Early prediction for the growth and development of plants was an important component of the intelligent breeding process. However, it is difficult to accurately predict and simulate plant phenotypes. A prediction model of plant growth and development was proposed based on spatiotemporal long short-term memory (ST-LSTM) to predict future growth and development of plant. Firstly, the plant masks were recognized and extracted by the pre-trained Mask R-CNN model and the background of the plant image was removed by morphological operations. Then, the plant growth and development prediction data set was constructed. After that, utilizing the spatial and temporal dependence of plant growth and development, the image sequence of plants future growth and development was predicted by the prediction model for plant growth and development using the spatial and temporal depth characteristics integrated from the image sequence of early plant growth and development. The results showed that the image sequence predicted by the proposed model had high consistency and similarity with the actual image sequence of growth and development. At the first prediction time node, the structural similarity index measure was 0.8741, the mean square error was 17.10, and the peak signal to noise ratio was 30.83. The prediction determination coefficient (R2) of canopy leaf area, crown width, and leaf number were 0.9619, 0.9087 and 0.9158, respectively. Finally, the research realized the prediction of growth and development based on the image sequence of plant growth and development, which would effectively reduce the time, land and labor cost of repeated experiments in the field, and provided a reference for improving breeding efficiency.

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王春穎,泮瑋婷,李祥,劉平.基于ST-LSTM的植物生長發(fā)育預測模型[J].農業(yè)機械學報,2022,53(6):250-258. WANG Chunying, PAN Weiting, LI Xiang, LIU Ping. Plant Growth and Development Prediction Model Based on ST-LSTM[J]. Transactions of the Chinese Society for Agricultural Machinery,2022,53(6):250-258.

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  • 收稿日期:2022-01-09
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  • 在線發(fā)布日期: 2022-03-22
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